Jake Smith
Also known as Jake A. Smith
Jake Smith is a chemist and senior researcher at Microsoft Research who uses AI to speed up the development of new materials. He studied chemistry at Rice University, then earned a doctorate in chemistry with the Moeller Group at Washington University and coauthored a 2017 review on anodic cyclization reactions. At Microsoft, his first project was DNA data storage, including a 2021 Science Advances paper on the first nanoscale DNA storage writer. His AI work spans the MOFDiff diffusion model in 2023, the MatterGen generative model for inorganic materials published in Nature in 2025, and CLIO, a reasoning agent that worked with chemists in 2026 to design a molecule for a flow battery. He is part of the Microsoft Climate Research Initiative in Redmond.
Timeline
-
2015–2017
Chemistry at Rice and WashU
He earns a B.S. in chemistry at Rice University and a Ph.D. in chemistry at Washington University in St. Louis with the Moeller Group. With the group, he coauthors a 2015 Beilstein Journal of Organic Chemistry paper on photovoltaic-driven organic electrosynthesis and a 2017 Accounts of Chemical Research review on anodic cyclization reactions with Ruozhu Feng and Kevin D. Moeller.
-
2021–2024
DNA data storage at Microsoft
After postdoctoral work on modifying proteins and on small-molecule drug design, he joins Microsoft to work with Karin Strauss on making DNA at large scale for digital data storage. In November 2021, he coauthors a Science Advances paper on the first nanoscale DNA storage writer. For a September 2024 Nature Communications study of particle radiation damage in DNA data storage, he performs the kinetic modeling.
-
October 2023
MOFDiff for carbon capture
MOFDiff, which he coauthors with Xiang Fu, Tian Xie, Andrew S. Rosen and Tommi Jaakkola in October 2023, is a coarse-grained diffusion model that generates metal-organic framework structures and is tested on designing materials for carbon capture. The paper appears at ICLR 2024.
-
December 2023–January 2025
The MatterGen generative model
In December 2023, Microsoft Research AI4Science announces MatterGen, a generative model for property-guided materials design, and thanks him among its contributors. The Nature paper, published in January 2025, lists him at Microsoft Research AI for Science in Redmond; MatterGen generates stable, diverse inorganic materials across the periodic table and can be fine-tuned toward a broad range of property constraints.
-
2024
Recyclable circuit boards
He coauthors an April 2024 Nature Sustainability paper on recyclable vitrimer-based printed circuit boards, led by University of Washington researchers and funded in part by the Microsoft Climate Research Initiative; he is an affiliate researcher in UW's Allen School. On the Microsoft Research Podcast in July 2024, he and Aniruddh Vashisth discuss using machine learning to design sustainable polymers. An Advanced Science paper he coauthors in December 2024 applies molecular dynamics and generative modeling to the inverse design of vitrimeric polymers.
-
October 2025
SimPoly force fields for polymers
SimPoly, posted as a preprint in October 2025 with him among the coauthors, is a machine learning force field that predicts polymer densities and glass transition temperatures from first principles. The work also introduces a benchmark of experimental bulk properties for 130 polymers and a quantum-chemical dataset.
-
May 2026
The CLIO design agent
In May 2026, he coauthors a preprint on CLIO (Cognitive Loop via In-Situ Optimization), a reasoning agent that leads proposal and interpretation in a closed-loop campaign with chemists to design an aqueous organic redox flow battery negolyte. Across 17 candidates over three rounds, the final sulfonate compound keeps a 90 mV improvement in redox potential over the literature baseline.
-
As of October 2026
Senior researcher at Microsoft
As of October 2026, he is a senior researcher at Microsoft Research in Redmond and part of the Microsoft Climate Research Initiative. His work at Microsoft spans DNA data storage, sustainability and the use of AI to speed up the development of new materials.
Sources and credits
Photo: We have no published photo of Jake Smith yet. Send us a free-licensed photo.
- Jake Smith at Microsoft Research
- Publications | The Moeller Research Group | Washington University in St. Louis
- Collaborators: Sustainable electronics with Jake Smith and Aniruddh Vashisth - Microsoft Research
- Scaling DNA data storage with nanoscale electrode wells - Microsoft Research
- Evaluating the risk of data loss due to particle radiation damage in a DNA data storage system | Nature Communications
- [2310.10732] MOFDiff: Coarse-grained Diffusion for Metal-Organic Framework Design
- Jake Smith at Microsoft Research
- MatterGen: Property-guided materials design - Microsoft Research
- A generative model for inorganic materials design | Nature
- New circuit boards can be repeatedly recycled | UW News
- [2510.13696] SimPoly: Simulation of Polymers with Machine Learning Force Fields Derived from First Principles
- [2606.02618] Closed-Loop Molecular Design with Calibrated Deference