Isidro Hotzel
Also known as Isidro Hötzel
Isidro Hotzel is a Distinguished Scientist (Technology) in Antibody Engineering at Genentech and a coauthor of generative-model papers on antibody design. After starting at Genentech in 2005 as a Scientist, they coauthored a 2015 paper on a dual-host phage display vector and an August 2019 study that sequenced more than 250,000 B cells across rat, mouse and human repertoires. In 2023, Hotzel coauthored AbDiffuser, a diffusion model that generates antibody structures and sequences, and the Discrete Walk-Jump Sampling paper, which received an Outstanding Paper award at ICLR 2024. A February 2025 lab-in-the-loop preprint with Hotzel among its authors reported more than 1,800 designed and tested antibody variants. Their group at Genentech works on phage display, antibody repertoire sequencing and bioinformatics tools for antibody engineering.
Timeline
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2005
Joining Genentech as a Scientist
In 2005, Hotzel starts at Genentech as a Scientist to develop technologies for antibody discovery against challenging targets. Collaborations with Genentech groups in molecular biology, oncology, infectious diseases, structural biology and protein engineering apply those technologies to potential therapeutic molecules.
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2015
A dual-host phage display vector
Hotzel coauthors a 2015 paper in Protein Engineering, Design and Selection on modular protein expression by RNA trans-splicing. The method allows flexible expression of antibody formats in mammalian cells from a dual-host phage display vector.
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August 2019
Single-cell B-cell receptor sequencing
In August 2019, they coauthor a Communications Biology paper on massively parallel single-cell B-cell receptor sequencing for discovering antigen-reactive antibodies. The study sequences more than 250,000 B cells from rat, mouse and human repertoires to characterize their lineages and expansion.
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June 2023
Discrete Walk-Jump Sampling
The preprint Protein Discovery with Discrete Walk-Jump Sampling appears on arXiv in June 2023 with Hotzel among its thirteen authors. The method learns a smoothed energy function, samples it with Langevin MCMC and projects back with one-step denoising; in laboratory tests, 97–100% of generated antibody samples are expressed and purified, and 70% of functional designs match or improve on the binding affinity of known functional antibodies.
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2023
AbDiffuser at NeurIPS
At NeurIPS 2023, Hotzel is a coauthor of AbDiffuser, a diffusion model that generates antibody 3D structures and sequences together. Laboratory experiments confirm that all 16 HER2 antibodies discovered are expressed at high levels and that 57.1% of the selected designs are tight binders.
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2024
An outstanding paper at ICLR
At ICLR 2024, Protein Discovery with Discrete Walk-Jump Sampling, with Hotzel among its authors, is presented as an oral and receives an Outstanding Paper award.
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February 2025
Lab-in-the-loop antibody design
In February 2025, the bioRxiv preprint Lab-in-the-loop therapeutic antibody design with deep learning lists Hotzel among its authors. It combines generative models, property predictors, active learning and laboratory experiments in an iterative loop, and over 1,800 unique antibody variants are designed and tested against EGFR, IL-6, HER2 and OSM. Every target gains variants with 3–100x better binding.
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As of October 2026
Distinguished Scientist at Genentech
Hotzel is a Distinguished Scientist (Technology) in Antibody Engineering, Drug Discovery, at Genentech as of 2026. Their group works on phage display, next-generation sequencing of antibody repertoires and antibody libraries, streamlined protein expression, assays for drug-like properties of antibody candidates, and bioinformatics tools for antibody engineering.
Sources and credits
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- Genentech: Isidro Hötzel | Distinguished Scientist (Technology), Antibody Engineering, Drug Discovery
- Massively parallel single-cell B-cell receptor sequencing enables rapid discovery of diverse antigen-reactive antibodies
- [2306.12360] Protein Discovery with Discrete Walk-Jump Sampling
- AbDiffuser: full-atom generation of in-vitro functioning antibodies
- ICLR 2024 Awards
- Lab-in-the-loop therapeutic antibody design with deep learning

