Magnus Rattray
Magnus Rattray is a machine-learning researcher who builds probabilistic models for biological data. At Manchester, he earns degrees in mathematics, physics and computer science, then works at Aston and holds academic posts in Manchester and Sheffield before returning to Manchester as a professor in 2012. From 2016 to 2025, he leads Manchester’s Institute for Data Science and AI; he becomes an ELLIS Fellow in 2019 and serves as co-president of the International Society for Computational Biology’s MLCSB group from 2020 to 2024. His work includes Gaussian-process models for gene-expression dynamics and CellPie, a 2025 method for spatial transcriptomics. As of October 2026, he is a professor at Manchester and Director of ELLIS Unit Manchester, holds an affiliated faculty appointment at the CRUK Manchester Institute, and leads the Generative Biology working group of an EPSRC AI hub.
- Now at
- University of Manchester, European Laboratory for Learning and Intelligent Systems and Cancer Research UK
Timeline
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1989–1996
Mathematics and computer science
At the University of Manchester, he earns a first-class BSc in mathematics and physics in 1992 and a PhD in computer science in 1996.
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1996–2010
Aston and Manchester research posts
He joins Aston University’s Neural Computing Research Group as an EPSRC Postdoctoral Research Associate in 1996. From 1998 to 2010, he works as a Lecturer and Senior Lecturer in the Department of Computer Science at the University of Manchester.
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2010–2012
Professorships in Sheffield and Manchester
In 2010, he becomes Professor of Statistical Bioinformatics and Machine Learning at the University of Sheffield, serving in its Sheffield Institute for Translational Neuroscience and Department of Computer Science. He returns to the University of Manchester in 2012 as Professor of Computational and Systems Biology in its Faculty of Life Sciences.
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2016–2025
Leading Manchester’s AI institute
From 2016 to 2025, he leads the University of Manchester Institute for Data Science and AI and directs the University’s AI strategy. He also serves as a Turing Fellow and Manchester’s Turing University Lead.
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2019
An ELLIS Health fellowship
He becomes an ELLIS Fellow on the ELLIS Health Programme in 2019.
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2020–2024
ISCB computational biology leadership
From 2020 to 2024, he serves as co-president of the International Society for Computational Biology’s Machine Learning for Computational Systems Biology (MLCSB) COSI.
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2019–2025
Gaussian processes and CellPie
In 2019, he coauthors a chapter on Gaussian-process inference for gene-expression time series and single-cell data, describing methods to identify dynamic genes, infer degradation rates and model branching dynamics. In 2025, he coauthors CellPie, an unsupervised factor-discovery method that combines spatial RNA transcripts and histology image features with joint non-negative matrix factorization; the team evaluates it on three human cancer types, including a high-resolution Visium HD dataset.
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As of October 2026
Professor, ELLIS director and CRUK affiliate
As of October 2026, he is Professor of Computational and Systems Biology at the University of Manchester, Director of ELLIS Unit Manchester and an ELLIS Fellow; he becomes the unit’s founding Director in 2021. In 2026, he joins the CRUK Manchester Institute as affiliated faculty and leads the Generative Biology working group of the EPSRC AI hub on Generative Models.
Career
- Since 2026Cancer Research UKAffiliated Faculty
- Since 2021European Laboratory for Learning and Intelligent SystemsFounding Director
- Since 1998University of ManchesterLecturer and Senior Lecturer, Professor of Computational and Systems Biology
- 2020–2024International Society for Computational BiologyCo-president
- 2010–2012University of SheffieldProfessor of Statistical Bioinformatics and Machine Learning
- 1996–1998Aston UniversityEPSRC Postdoctoral Research Associate
Education
- 1996University of ManchesterPhD in computer science
- 1992University of ManchesterBSc in mathematics and physics
Sources and credits
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- Magnus Rattray - Research Explorer The University of Manchester
- Magnus Rattray | Cancer Research UK Manchester Institute
- Modelling gene expression dynamics with Gaussian process inference - Research Explorer The University of Manchester
- CellPie: a scalable spatial transcriptomics factor discovery method via joint non-negative matrix factorization - Research Explorer The University of Manchester
- Magnus Rattray | European Laboratory for Learning and Intelligent Systems
- Home | Ellis Manchester


