Researcher

Niko Beerenwinkel

Niko Beerenwinkel connects mathematics, statistics and computer science with biology and medicine. Beerenwinkel earned a computer-science doctorate at Saarland in 2004, worked as a postdoctoral researcher at Berkeley and Harvard, and joined ETH in 2007. His work includes probabilistic models, genomic data analysis and methods for understanding the genetic diversity of tumors and pathogens. A 2020 ETH report describes his group’s machine-learning methods for identifying meaningful tumor variation in noisy genomic measurements. As of October 2026, Beerenwinkel works on computational methods for tumor evolution and viral genomic diversity. These are research tools that support biomedical analysis.

Works
567
Citations
22,357
h-index
68

Publication numbers from OpenAlex, as of 14 October 2026.

Photo of Niko Beerenwinkel

Timeline

  1. 2004–2007

    Doctoral and postdoctoral research

    Beerenwinkel earned a computer-science doctorate at Saarland in 2004, followed by postdoctoral work at Berkeley and Harvard before joining ETH in 2007. He had previously trained in mathematics and biology at Bonn.

  2. Spring 2016

    Computational genomics programme

    Beerenwinkel was a visiting scientist in Algorithmic Challenges in Genomics in spring 2016. His research includes methods for virus populations, HIV drug resistance and probabilistic network reconstruction.

  3. 2020

    Learning from noisy tumor data

    His group develops machine-learning methods for finding and interpreting genetic diversity in tumors. It explains the need to separate noise from useful genomic signals.

  4. As of October 2026

    Tumor evolution and viral diversity

    His lab develops methods for reconstructing tumor evolution, analyzing single-cell genomic data and estimating viral genetic diversity. He is a professor of computational biology.

Sources and credits

Photo: live-simons-institute.pantheon.berkeley.edu; creator not stated. License: Not stated by source. Source: live-simons-institute.pantheon.berkeley.edu. Cropped to a square and resized. Ask us to remove or replace this photo.

  1. Simons Institute: Niko Beerenwinkel, 2016 programme biography live-simons-institute.pantheon.berkeley.edu. Checked 13 October 2026.
  2. ETH: Mapping the depths of the genome, 2020 ethz.ch. Checked 13 October 2026.
  3. ETH Computational Biology Group: direct research page bsse.ethz.ch. Checked 13 October 2026.